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Assay quality controls and GLP compliance

  • 1.  Assay quality controls and GLP compliance

    This message was posted by a user wishing to remain anonymous
    Posted 03-26-2025 11:20
    This message was posted by a user wishing to remain anonymous

    We have a cell-based CSF NAb assay in our clinical study.  A mouse Nab+ serum is used as a positive control because we are not able to find a human NAb+ CSF sample.  As such, is this assay considered to be a non-GLP/ research assay?   Thank you!



  • 2.  RE: Assay quality controls and GLP compliance

    Community Leadership
    Posted 03-27-2025 09:59

    Your question indicates several misunderstandings regarding GLP.  First, the GLPs are applicable only to non-clinical work; clinical assay testing is not within the scope of the GLPs.  Second, GLPs focus on performing work in a manner that can be readily reproduced.  Assay validation is not an aspect of the GLPs. 

    Now, to get to the root of your question.  The key aspect is whether you have an appropriate positive control to demonstrate that the assay methodology is valid; an actual human derived NAb positive control is not an absolute requirement.  If the mouse derived positive control, spiked into human matrix, can be shown to neutralize the activity of the therapeutic, it should be an acceptable positive control for the assay.  You should focus, through your assay validation experiments, on demonstrating that the assay is fit for purpose.  Furthermore, the analytical work should be performed in a fully documented manner in order to allow its re-creation. If both of these criteria are met, the assay results should be acceptable to regulators with respect to supporting the clinical immunogenicity conclusions. 



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    Eric Woolf, Ph.D., FAAPS
    Souderton, PA

    Disclaimer: Opinions expressed are solely my own and do not express the views or opinions of my employer.
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  • 3.  RE: Assay quality controls and GLP compliance

    Posted 03-28-2025 13:09
    Eric
    Thank you for explaining what GLP pertains to and what it doesn't.  I can't tell you how many times I've tried to explain what you just said to a client or colleague.  It's a pervasive misunderstanding.






  • 4.  RE: Assay quality controls and GLP compliance

    Posted 03-27-2025 14:34
    Dear Anonymous,

    Your best choice of Positive Control in this case is normal human CSF, spiked with anti-drug antibody, either a monoclonal or an affinity-purified polyclonal. The species of the PC antibody is not important, but the matrix should be same as the samples and the PC antibody must be neutralizing.

    John Kamerud
    JK Bioanalytical Consulting LLC 





  • 5.  RE: Assay quality controls and GLP compliance

    Posted 03-28-2025 10:15

    You are describing a critical assay reagent that is is mouse-derived. Most positive controls used in immunogenicity assays are produced using animals. It is not possible to obtain a human Ab . As John mentioned, what is needed is a purified animal-derived anti-drug antibody + the assay matrix (e.g. normal human serum). The only GCP-related problem I see now that when you validate the current assay, it will be hard to determine assay sensitivity, drug tolerance, and LPC concentration without using a purified antibody as PC. 



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    Anna Schwartz
    Associate Director, Bioanalysis
    Kyowa Kirin, Inc.
    Princeton NJ
    [email protected]
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  • 6.  RE: Assay quality controls and GLP compliance

    Posted 03-28-2025 13:46
    So, we all agree on what the PC should be. I have one other comment, at the risk of overstepping my bounds, since I know nothing about the drug or its MOA:

    It seems a little unusual to me to be performing a NAb assay on CSF. If there is ADA in the CSF, it got there by transit from the blood, and serum titers are probably much higher than CSF ones. So if you did screening assays and found ADA in the serum and CSF, the next step I think would be a NAb assay on the serum samples; you might not even have to test CSF for NAb.





  • 7.  RE: Assay quality controls and GLP compliance

    Community Leadership
    Posted 05-14-2025 15:59

    Thank you, John and all who have responded on this question so far.  

    This is a cell-based NAb assay for a AAV mediated gene therapy administered directed into the brain.  We monitor NAb responses in CSF and serum.  I have a follow up question: is it a requirement that the positive QC being a normal human CSF, spiked with a monoclonal or an affinity-purified polyclonal ADA from animals?  Given that ADAs in CSF are likely derived from the blood, a human serum sample exhibiting neutralizing ADA activity could also serve as a suitable positive control for the CSF NAb assay, correct?



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    Yan Ni Ph.D.
    Executive Director
    Passage Bio
    Philadelphia PA
    [email protected]

    Disclaimer: Opinions expressed are solely my own and do not express the views or opinions of my employer.
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  • 8.  RE: Assay quality controls and GLP compliance

    Posted 05-14-2025 17:49
    Yan,

    It’s always best to have controls in the same matrix as test samples. There may be different interferences or matrix effect between serum and CSF. Also, presuming that your cut point was determined using normal CSF samples, will it be appropriate for a control in serum?

    John
    Sent from my iPhone




  • 9.  RE: Assay quality controls and GLP compliance

    Posted 05-21-2025 10:52

    Hi Yan,

    Although a 'a human matrix sample exhibiting neutralizing ADA activity' would serve as an ideal PC for any clinical assay, the challenge you would run into with using this is sourcing enough of it to use it long term for the duration of your study. Additionally, utilizing a 'serum PC' for a CSF assay may not be appropriate as they may not be indicative of nAb responses in CSF. 

    As mentioned in other comments, using an animal derived PC spiked into the same matrix as your study sample serves as an acceptable surrogate PC for studies. (The FDA guidance for Immunogenicity Testing  has a section for Selection of reagents for reference)



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    Alok Rathi M.S.
    Manager
    BioAgilytix Boston
    Watertown MA
    [email protected]

    Disclaimer: Opinions expressed are solely my own and do not express the views or opinions of my employer.
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  • 10.  RE: Assay quality controls and GLP compliance

    Posted 05-21-2025 15:44
    Another possibility would be to take a pool of positive human serum and affinity-purify the ADA, then spike that into CSF. One problem with using unpurified antiserum is that you can’t assign a concentration to it, for purposes of determining sensitivity and drug tolerance.

    John Kamerud
    Sent from my iPhone




  • 11.  RE: Assay quality controls and GLP compliance

    Posted 05-21-2025 16:48
    The problem with having true human ADA is that you need sufficient material to a) do method development and validation (which means getting ADA+ samples before beginning assay work), b) to last through clinical sample testing.  One fervently hopes the ADA response is not so robust that this is actually available.  
    Another approach is to take an animal Nab+ and clone it into a human IgG framework-not terribly difficult these days, just time and money.  But except for extraordinary circumstances (e.g., an animal Ig just isn't suitable for the method) a cloned animal PC should work just fine.
    Personally I've never had an issue with a non-human ADA+ for all assay work, in fact a cloned mAb to me is preferred for practical reason.






  • 12.  RE: Assay quality controls and GLP compliance

    Community Leadership
    Posted 05-22-2025 08:32

    Thank you, John, Alok and Eric.  

    It is good to know that purified mAb or pAb, from human or non-human origin (with sufficient material), spiked into human CSF could be a suitable QC. 



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    Yan Ni Ph.D.
    Executive Director
    Passage Bio
    Philadelphia PA
    [email protected]

    Disclaimer: Opinions expressed are solely my own and do not express the views or opinions of my employer.
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  • 13.  RE: Assay quality controls and GLP compliance

    Community Leadership
    Posted 05-22-2025 15:10

    If you do have a nice source of human nAb against AAV, it would be nice to have it for things like validation experiments. Of course once you purify it, you would lose the low and extremely high affinity portions of the polyclonal response. 

    Using the serum itself is reminiscent of vaccine assay validations, where use of human serum from earlier trials is a requirement for later stage validations. For ADA, however, we are generally looking for smaller responses in fewer subjects, so it can be difficult to get sufficient material for the surrogate positive control.



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    Joleen White Ph.D.
    AAPS 2024 Global Health Community Chair
    Bioanalytical 101 Course Development
    Senior Advisor
    BioData Solutions LLC
    [email protected]

    Disclaimer: Opinions expressed are solely my own and do not express the views or opinions of my employer.
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